Downloads


Current Release - PICKLE 3.2 (released on Mar 1, 2021)

 

Human PICKLE

Ontological network in OWL format (based on UniProtKB version 2020_06, GenBank 2020-12-14, ENA release 143, RefSeq 2020-12-14 and Ensembl release 102)

PPI network (based on IntAct release 236/2020-12-11, BioGRID release 4.2.192/2020-11-25 and HPRD release 9)

 

Mouse PICKLE

Ontological network in OWL format (based on UniProtKB version 2020_06, GenBank 2020-12-14, ENA release 143, RefSeq 2020-12-14 and Ensembl release 102)

Orthologues List (based on MGI Vertebrate Homology release 6.16-01/12/2020 and Ensembl release 102)

PPI network (based on IntAct release 236/2020-12-11 and BioGRID release 4.2.192/2020-11-25)


Archived Releases

PICKLE 3.1 (released on Aug 07, 2020)

 

Human PICKLE (equals to PICKLE 2.5)

Ontological network in OWL format (based on UniProtKB version 2019-10, GenBank 2019-11-04, ENA release 141, RefSeq 2019-11-04 and Ensembl release 98)

PPI network (based on IntAct release 227/2019-11-04, BioGRID release 3.5.178, DIP release 20170205 and HPRD release 9)

 

Mouse PICKLE

Ontological network in OWL format (based on UniProtKB version 2019-10, GenBank 2019-12-16, ENA release 141, RefSeq 2019-12-16 and Ensembl release 98)

Orthologues List (based on MGI Vertebrate Homology, accessed 18/03/2020 and Ensembl 99)

PPI network (based on IntAct release 228/2019-11-20, BioGRID release 3.5.179 and DIP release 20170205)


 

PICKLE 2.6 (released on September 30, 2020)

Ontological network in OWL format (based on UniProtKB version 2020_03, GenBank 2020-09-11, ENA release 143 and Ensembl release 100)

PPI network (based on IntAct release 234, BioGRID release 3.5.187 and HPRD release 9)

Note: Since this release, PICKLE integrates every database included by IntAct.

 

PICKLE 2.5 (released on November 15, 2019)

Ontological network in OWL format (based on UniProtKB version 2019-10, GenBank 2019-11-04, ENA release 141, RefSeq 2019-11-04 and Ensembl release 98)

PPI network (based on IntAct release 227/2019-11-04, BioGRID release 3.5.178, DIP release 20170205 and HPRD release 9)

 

PICKLE 2.4 (released on June 18 2019)

Ontological network in OWL format (based on UniProtKB version 2019-05, GenBank 2019-06-14, ENA release 139 and Ensembl release 96)

PPI network (based on IntAct release 224/2019-06-14, BioGRID release 3.5.173, DIP release 20170205 and HPRD release 9)

 

PICKLE 2.3 (released on October 31 2018)

Ontological network in OWL format (based on UniProtKB version 2018_09, GenBank 2018-10-03, ENA release 137 and Ensembl release 94)

PPI network (based on IntAct release 218/2018-09-07, BioGRID release 3.5.165, DIP release 20170205 and HPRD release 9)

 

PICKLE 2.2 (released on May 11 2018)

Ontological network in OWL format (based on UniProtKB 2017_12, GenBank release 222, ENA release 133 and Ensembl release 91)

PPI network (based on IntAct release 2017-11-06, BioGRID release 3.4.155, DIP release 20170205 and HPRD release 9)

 

PICKLE 2.1 (released on August 11 2017)

Ontological network in OWL format

PPI network

 

PICKLE 1.1

PPI network